Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879520.1_cds_XP_016437206.1_32990
CDS Infomation

[gene=LOC107763246] [db_xref=GeneID:107763246] [protein=casein kinase I-like isoform X4] [protein_id=XP_016437206.1] [location=join(30787..31200,31448..31573,31650..31723,31825..31894,31973..32028,32169..32240,32429..32523,32823..32889,32979..33108,33204..33422,33504..33638)] [gbkey=CDS]
Sequence

ATGCCAGATCTGCGTAGGGGAGCACGGAGATCAAAACGGCTTGGTGATCCCCAGCCTGCC
CCAGAACCCTCTGGCCAAGAAGAAAATTGGGTTTTGCCTACTCAGAACAGAGGTCGAAGA
AGAGGTGGTGGTGGAAGAGGAAGGGGTAATGCAACAGCTGTAGCAAAAGGGCCTTCAGCA
GCGACGCGGGCAAGGCCTGGTGGTGCTGGTAGGGGTAGGGGGATTAGGTTGATAGATTTA
GATCCGGAGCCACCTTGTGAGGTTCTTCCTCAAGCTGTTCCTGTTGGTGTTGCAGAGCCA
GCTCTTAATAGAGCTGAGGGTGCTGCAGATAAAAATATTGCAATGGAAGGTGGGAATAGA
GACAAAATAATGGGAGTTGAAGAAGAAGCAAGCACAACTCCAGTACCTGATAGGGTGCAA
GTGGGTAATTCTCCTGTATATAAAACAGAAAGAAGATTAGGTAAGGGTGGATTTGGACAA
GTTTATGTTGGTCGTAGAACAAGTGGAGGAACTGAGAGAACAGGACCAGATGCTGTTGAG
GTTGCATTAAAGTTTGAGCATCGAAACAGTAAGGGTTGCAACTATGGCCCTCCTTATGAG
TGGCAGGTGTACAATACCCTAAACGGCTGCTATGGGATCCCAGGGGTTCATTATAAGGGT
CGTCAGGGAGATTTTTACATTCTGGTGATGGACATGCTTGGACCGAGCCTTTGGGATGTC
TGGAACTCTTTAGGCCAGTCAATGTCACCAAATATGGCGGCCTGTATCGCTGTGGAGGCA
ATATCAATTCTCGAAAAGCTTCACCTTAAGGGGTTTGTGCATGGAGATGTGAAGCCAGAA
AACTTTTTGCTTGGTCAGCCAGGAAGTGTTGATGAGAAGAAGCTGTATCTTATTGATCTT
GGTTTAGCATCTAGATGGAAAGATTCAGCATCTGCTCAGCATGTCGAGTATGACCAGAGG
CCAGATATATTCAGGGGTACTATAAGATATGCAAGTGTACATGCACATTTAGGTCGGACC
GGGAGTAGAAGGGATGACCTTGAGTCTCTAGCATACACATTAATATTCCTTATAAAGGGA
AGGTTACCATGGCAAGGCTATCAGGGTGACAACAAGAGTTTTCTAGTCTGTAAAAAGAAA
ATGGCCACTTCACCAGAGTTGATGTGTTGCTTTTGCCCTACCCCATTCAAGCAATTCCTT
GAGGCTGTAACAAACATGAAGTTTGATGAGGAACCGAATTACGCCAAGCTCATATCATTC
TTTGAGAGTCTTATTGAGCCCTGCACATCACTGAGGCCAATAAGAATTGATGGGGCTCTT
AAGGTTGGGCAGAAGCGTGGAAGACTGCTAATAAACTTGGAGGAAGATGAGCAACCAAAG
AAAAAAGTGCGACTCGGTAGTCCTGCAACCCAATGGATTTCAGTTTATAATGCACGGCGT
CCCATGAAACAGAGGTAG

Peptide Sequence

PEP ID

XP_016437206.1
PEP Infomation

PREDICTED: casein kinase I-like isoform X4 [Nicotiana tabacum]
Sequence

MPDLRRGARRSKRLGDPQPAPEPSGQEENWVLPTQNRGRRRGGGGRGRGNATAVAKGPSA
ATRARPGGAGRGRGIRLIDLDPEPPCEVLPQAVPVGVAEPALNRAEGAADKNIAMEGGNR
DKIMGVEEEASTTPVPDRVQVGNSPVYKTERRLGKGGFGQVYVGRRTSGGTERTGPDAVE
VALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPGVHYKGRQGDFYILVMDMLGPSLWDV
WNSLGQSMSPNMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSVDEKKLYLIDL
GLASRWKDSASAQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKG
RLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPTPFKQFLEAVTNMKFDEEPNYAKLISF
FESLIEPCTSLRPIRIDGALKVGQKRGRLLINLEEDEQPKKKVRLGSPATQWISVYNARR
PMKQR

Transcript Sequence

Gene sequence data has not been registered.